PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_000704-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 284aa    MW: 30680.9 Da    PI: 5.4872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_000704-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.7e-11175222455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  NNU_000704-RA 175 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKAVVLDEIINYIQSLQ 222
                    8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-18169240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.16E-11169226No hitNo description
Gene3DG3DSA:4.10.280.101.1E-18171239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.018171221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-8175222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-11177227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MDPPSLINEG SFPAANPSPY SLAEIWPFPL NGGGGVGDSA GVLGLRRNNF GQNLGGFVES  60
AGTGTAVNRD MSIDESTITE QSVSRGGNGR KRRDAGSEDE SSKLVSTSSG NDVNDCDGKR  120
LKVSRSKDEN GDSKTETEAS SGAGNKPAEQ NTQPLERPKQ DYIHVRARRG QATDSHSLAE  180
RARREKISER MKVLQDLVPG CNKVIGKAVV LDEIINYIQS LQRQVEFLSM KLEAVNSRMN  240
PGIEGFPSKD FGAQTFDTTS MAFSSQAARE YGQGSPPEWL HMQI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010255699.10.0PREDICTED: transcription factor bHLH79-like
SwissprotQ9LV171e-78BH079_ARATH; Transcription factor bHLH79
TrEMBLF6GTC51e-138F6GTC5_VITVI; Putative uncharacterized protein
STRINGVIT_17s0000g05370.t011e-137(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.17e-90BIG PETAL P